rs30468908 SNP Detail

Summary

• ID
  rs30468908
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148602255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCCCACCT CAGAGCTATA
  AAATGCCAAG CCATAACTCT CCCGGCTGGA GGCTAGTGAT TGGGAGTAAA TACCTCCAGG
  CAACAGGCGC AGAAGCCTCA AATCATCTGC ATCTAGGACG AGGCTAACAG GAACAGGTGC
  TCTGCTATGA CAGGAACCGG AAAGGTCACA ACTGGAACGC CACCACTGGT TGTCACAACC
  R
  TAAGCATCTT GGCCAAATGA TATGGTGCTT TGTCAACAAA GAGCACGCTT TGTTGGACTT
  GAAGCGAGTG GGGACAAGCA CTTTGCCTTT CTGCCCTTGG CTCTATTCAG ACTTGAACAC
  AGTGCTGTGG GAATCGTGTC TATAAAAGGG GCTCTTATTA ACCAGAATAT AAAAGTTTCA
  AGGTCTCTCC CTGGTGCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47450778	NES10331231	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30468908					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47450778	NES10331231	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148602255 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr375899	regulatory region 375899	1834 bp upstream
Rr587222	regulatory region 587222	638 bp distal
Rr587223	regulatory region 587223	within coordinates
Rr587224	regulatory region 587224	1994 bp proximal