rs30467296 SNP Detail

Summary

• ID
  rs30467296
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7655461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGAAAAC CCTACTATTT
  TATGAGAAAC ATTGACTCTT AAGGGTTTAA CATAATTCAG TAGTCAGGTA AACGATCGAT
  CATTTCTTCC ACAACACAAT AGTTTGGGGC TGTTTGTTTA TTTGTTTTTA TTTGTCTAGT
  TTACTTGTTT AAGGAGAAGC TTCTGCAGAA AAAAGAAATT GAACTTAAGA GCTAGACTTA
  R
  ATAGACTTCT AGTTTCTTGG CAGTTATGTC ATCCCTAAAA CATGGAGAGA AATGACCAGT
  TGCAGGGTTC TATAGCAGGA CTTGGTTGCT GAAACTTTGA AAGCACAAAG TTGGTCATTT
  TTTACTTTCC AAATTGGAAT TCCTACTTGA TTGATCATCT TGATTCTCAA TGAAGTTTTG
  CTAGTTGTGC TACTGCTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45933211	mCV24780960	ABI	CRAMUS_MOUSE	f	SNP		A	G				G	G
ss47784888	NES11725918	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	A		G	G	G		A	G	A		A
ss132952889	ENSMUSSNP672778	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G					G
ss321734383	CHEV_6_7605461	CHEVERUD	SCREENING_POP	f	SNP											G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs30467296					SNP	A	A	G	G	G	A	G	G	G	G	G	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47784888	NES11725918	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7655461 () rs orientation: forward

Symbol	Name	Function Class
Gm35051	predicted gene, 35051	within coordinates
Rr626301	regulatory region 626301	1333 bp proximal