rs30466866 SNP Detail

Summary

• ID
  rs30466866
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90608696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTGAATCA CATGCATCTA
  GGTGGGTGCT CTACCAGCCA GCTGTAGTTC CTGCTTTCTT TCTTTTTTTT TTTTTTTACT
  TATTATTTTG AGACAAGGGC TTGCTCAGTT GCCCAGGCTG GCTTTGAACT CACTCTGTGG
  CCCAGGCAGG CCTTGGCCTG TGACCTTCTT ACCTCAGTCT CCAGAGCGGC AGGTGTATGT
  Y
  ACCACACCCA GCTTTGTACT CTTCTTTATG GATTTTATGC TGTATCTTTA AAAGAAGGCC
  TTTGGTGGTC AGAGATATTT TTAAACATTT ACTTGATTCT TGCTAGATAT CATGTAGAAT
  AGCTAACCTT GACATCTCAA TCCTCCTGCC ATGGCTCTCA CTGTGGGAAC AGGCAGGTAT
  GACCATGCCT GGTTGCAAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45932070	mCV23228228	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss133378200	ENSMUSSNP3679471	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs30466866					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90608696 () rs orientation: forward

Symbol	Name	Function Class
Rr634261	regulatory region 634261	1792 bp distal
Rr634262	regulatory region 634262	1860 bp distal
Rr634263	regulatory region 634263	1642 bp distal
Rr634264	regulatory region 634264	1015 bp proximal
Slc41a3	solute carrier family 41, member 3	Intron