rs30466074 SNP Detail

Summary

• ID
  rs30466074
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132407427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAACATGAAT GCATTTTTGA CATACAAATC TAATATTACG TCAATTTATA AAAGCACACT
  ATGAAAAGTA GAACGAGTCT TCTGTATTCA ACTGTCTCAA AATTGGTTTA ATGAAAACAG
  TCACTGTAAT CATTTGATTC CAATTCCATG AGCAGTCTGT GTTGAAATAC AGTGCAGCTG
  AGGACCTCTA GTGTCACTGC TGAATATGGC ATTAATTTGT AAAGATACTG TAAAGGTGTT
  TGTGTGTGTA TGTTTGTGTG TGTGTGTTTG TGTGTGTGTG TTTGTGTGTG TGTGTGTGTG
  W
  GTGTGAGAGA GAGAGAGAGA GAGAGCGCAA GAATAAAAAG AAGAGCTAAA GTTAGCTTAT
  AGAACCAAAT GAGATGCTTA AATGAAGTTT TTTTCACTTA GAATTTTTGA GCATTTTAAT
  TAAAATATAT TTATACATCA CTTCCTACCT TTCCTTTCTT CCTTTCAGCC CCTACCATAC
  CCCCTACTAT AAAATTGATA GCCTCTTTAA AAAATTATTA TTGTTACATA TAAATATATG
  CACAATATGT AAATCCAACC TGCTGAGTGT ACTCTTGTTA TGTGTGCATA TACGATTTCA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45433720	mCV22641134	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30466074					SNP	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132407427 () rs orientation: forward

Symbol	Name	Function Class
Rr585446	regulatory region 585446	1 bp distal
Tbck	TBC1 domain containing kinase	within coordinates