rs30465530 SNP Detail

Summary

• ID
  rs30465530
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72873064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAAATAAACT CAAAGCTTAC GCTGCAGGTT AACCACGTAC TGCAAGGCCA GGGATGCAGC
  TTGGCTGTAA AGTGCTTACC CAGCATGTAT GAAGCTCTGG GTTCAAGTCC AACACTACAT
  AAACCAGACA TGGTGCTACG TGCCTGTTAG CTGGGAAGTT GAAGGAAGAA AACCTCAAGG
  TCACTCTTGG TCACAAAAAC TTCAAGACCA GCCAGAAACC TATGACCCTG TCTCAAAAAT
  AACAAGCAGA ACAACACATG TGTTCCACAA CTGAGCTATA GTCCTAGCCA GAGACAGTTT
  W
  AAAAAAAAAC CTAGAAAACA GAAAATGACT GGGTTTGGTG TAAGACAGAA AACTAGATAC
  TGTTGACAGT ATCAACTGTT GACCACACAG AGTGACTTGG TGCTAGTACC TAAGAAATGT
  TTGCTAACAT GGCAAGAACA TTTCAAAATG AGGTGAAAAA GAGGCCTTGG AATTCTCCCC
  AGTCAAGTCA TATAGCAACA GGAATTTCAC TGTTGTGGAG ACCCGCCACT CCACTAACAC
  CTACCTGAAA AGGTGGGTGT TATTCACCAA CCCTTCTGCT CCTAAGGGGC AGGAGTTGGT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45931956	mCV22364460	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	T
ss133287913	ENSMUSSNP2993677	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30465530					SNP	A	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72873064 () rs orientation: forward

Symbol	Name	Function Class
D530018E20Rik	RIKEN cDNA D530018E20 gene	162 bp upstream
Kcmf1	potassium channel modulatory factor 1	Intron
Rr632326	regulatory region 632326	723 bp distal