rs30464181 SNP Detail

Summary

• ID
  rs30464181
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127622971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACATGGTA AGGAACAGAC
  TCCCATTCAC CAAGTACACA GGATAGGCCC TGAACTGACC TAATTCTCGC ACGTGTCTCA
  GAGACATTTC CTTTCCTCAA TACTCCTACG GCTACTGTTA CCCTAGAGAG ATCTCCACTG
  TCCAGTATGA CAGCCACTAG CACTTGAGAT GCAACCAGTC TGAATTTGGA GGGCTATAAA
  R
  TGTCAAATTG AACTGGATTC CAAAGAGAGT ACAAAAGTAA CTGAAATATC TCCTCGAGTA
  ACTAAGCTCT GCAGCATATC TGCATGACTA GATATGACGA ACGTTCTGAT CGCCTTTGAT
  TTGTCCTCTA TGTTTAATTC ATCAGTTCCA CAGCCGAAAA CGCTGCCACA CATCCAGTAC
  TAAGTGTGCG GCTTTGAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45432866	mCV23993995	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	G
ss135872291	ENSMUSSNP4597520	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
ss320957251	CHEV_3_127532240	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30464181					SNP	A	A	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127622971 () rs orientation: forward

Symbol	Name	Function Class
Ap1ar	adaptor-related protein complex 1 associated regulatory protein	Intron
Gm43654	predicted gene 43654	233 bp downstream
Rr584870	regulatory region 584870	1806 bp distal
Rr584871	regulatory region 584871	897 bp proximal
Rr584872	regulatory region 584872	1487 bp proximal