rs30464128 SNP Detail

Summary

• ID
  rs30464128
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148617475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTGCCCTT TTATTCCCTA AAGTATCTGC ATGTGGCATA
  TTCTATTAAA ACAAGATGCT ATCTAAGGGA GAGTGAAACA CACACAGTCT CCTCAGGACG
  M
  ACTGTGCTGG GAAGGGTTTG ACCAGGAAGT TTTTATTTGC ATTGTGATAA ACTATTCTCC
  ACTGTGAACT AACCTCTTAT AAGAAATTAC TCTAGACTT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47450568	NES10330814	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	C	C	C	A	A
ss136065154	ENSMUSSNP4654094	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30464128					SNP	A	A	A	A	A	A	C	C	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47450568	NES10330814	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148617475 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr375900	regulatory region 375900	within coordinates
Rr587226	regulatory region 587226	1162 bp proximal