rs30462808 SNP Detail

Summary

• ID
  rs30462808
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17594197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATTGCTTT TCTTGGCTTC
  AAACTAACTC TGGCAATTTG TCCTAATCTT TTGGCTCCTT CTCATTCTCT GGCATCAACT
  GCCTCTGACC TGCGCTGAGT TGCAAGAACT CATGAATGAG TGAAGCCAAT TCCACTGCAC
  TGCTCTAACT GTACTGACTC CCAACTGACT CACTCTTCCT GTGCTGCTCT TAAATAGCTT
  S
  CGTTTCCTGT CTGTTCTTGT CAGAGCTGTA TGTAACCTAT ATCTGACTCA TTAGGTCAAA
  TCTATCTATG ATTCATCACT TTGCCTGCCC TTCATGAGAC TTCACTTTCA AACATGGCTC
  CTTCCTTCTA CAAACTAATT TTACCTTAAA GGTATGTACT AAGGGTGTAT GTGTATTTCA
  GCCAGAGGGA TTAAAGGTGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45930329	mCV23973140	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss133018317	ENSMUSSNP829390	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs30462808					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17594197 () rs orientation: forward

Symbol	Name	Function Class
Gm53318	predicted gene, 53318	637 bp downstream
Rr626818	regulatory region 626818	1488 bp proximal