rs30462471 SNP Detail

Summary

• ID
  rs30462471
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86790303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCA ATTGCAGAAC ACCTGTCGCC
  Y
  GCACACAGGC ATACATGCAG GCAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45931726	mCV22628487	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss133359738	ENSMUSSNP2732190	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321847435	CHEV_6_86763315	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30462471					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86790303 () rs orientation: forward

Symbol	Name	Function Class
Rr633524	regulatory region 633524	11 bp proximal
Rr633525	regulatory region 633525	96 bp proximal
Rr633526	regulatory region 633526	1766 bp proximal