rs30458668 SNP Detail

Summary

• ID
  rs30458668
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82959112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACT ACTTACAGGC ACAGAGGTGG
  Y
  AAATGCTGGT ACCAGACTTG AGCAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45433490	mCV23186921	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss135410418	ENSMUSSNP1645993	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss320820902	CHEV_3_82855727	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30458668					SNP	C	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82959112 () rs orientation: forward

Symbol	Name	Function Class
Fgb	fibrinogen beta chain	1942 bp upstream
Rr375252	regulatory region 375252	1423 bp downstream
Rr578824	regulatory region 578824	1953 bp distal
Rr578825	regulatory region 578825	1747 bp distal
Rr578826	regulatory region 578826	1693 bp proximal
Tssr33826	transcription start site region 33826	1988 bp upstream