rs30457350 SNP Detail

Summary

• ID
  rs30457350
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148644143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTCTCT CTCTCTCTGT
  CACACTCACA CATACACACA CACACACACA CACACACACA CATATACACC ACATATACAC
  ACTCCCTCAG GCACACACTC AAAATGAATA TTTTAAATGT CAGTAACCCA CTGGACTAAT
  TAGCGCCACA TTTTACTGCC TTTGAAATTA ACTTTTTGTT GTCCCCATGA GAAATGTCCC
  K
  AACCATAGTG TCACTGCTGA GTGCTGAGTG AAAGCACATA GGGACTAAGT CAGTACAAAT
  GACAATAAAT GTCAGAGTGT GAGTTGCAAT GATGTATGCT GGGAAATTTC CATCTACCAT
  TGTGTGGTCA CCACAGCGGC TAGGAGAACT CTCAAAGGCC AAGAGAAGTT ACAGGAAGCC
  AAATAAAATG TTCCTACTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss47450040	NES10330365	PERLEGEN	MM_PANEL2	f	SNP	G	T	G	G	T	T	T	T	T		T	T	T	T
ss321016869	CHEV_3_148601471	CHEVERUD	SCREENING_POP	f	SNP										T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30457350					SNP	G	T	G	G	T	T	T	T	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47450040	NES10330365	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148644143 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587231	regulatory region 587231	817 bp proximal