rs30456837 SNP Detail

Summary

• ID
  rs30456837
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95493683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTTCAGT GATATAATCT
  TACAATTATT TTTCTTCTAT CTAAAACAAC TCAAATATCT TACCTTTTGT GAGGATATAC
  TTTTAGATAA GTTGTATGTC AACAATAAAT TATACTCTAC TTTAAAATTA TCCCAGGCAA
  ATTTCTGAGT TTGAGGCCAG CCTGGTCTAC AGAGTGAGTT CCAGGACAGC CAGGGCTACA
  S
  AGAGAAACCC TGTCTCAAAA AACAAAAACA AAAACAAAAA CAAACAAACA AACAAACAAA
  TAAATAAAAT TATCCCAGGT AGCATATCTT AGTAGAAAAT ACCTATGCTG GGCTGGAGAT
  GTCATTCAGT CAGTAGAGTG CCTGCTTAGC ATGCATAGAA CCCTGTGTTA CTAGACTTTC
  ACCACCACAC CAAACCATAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45430373	mCV23591601	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30456837					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95493683 () rs orientation: forward

Symbol	Name	Function Class
Gm40097	predicted gene, 40097	within coordinates
Hormad1	HORMA domain containing 1	Intron
Rr580975	regulatory region 580975	1569 bp proximal
Rr580976	regulatory region 580976	1887 bp proximal