rs30456531 SNP Detail

Summary

• ID
  rs30456531
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148644311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACTTTTTG TTGTCCCCAT
  GAGAAATGTC CCTAACCATA GTGTCACTGC TGAGTGCTGA GTGAAAGCAC ATAGGGACTA
  AGTCAGTACA AATGACAATA AATGTCAGAG TGTGAGTTGC AATGATGTAT GCTGGGAAAT
  TTCCATCTAC CATTGTGTGG TCACCACAGC GGCTAGGAGA ACTCTCAAAG GCCAAGAGAA
  R
  TTACAGGAAG CCAAATAAAA TGTTCCTACT CTAGACACTT AGCACCTCAT TATCTTCCAA
  TAATATAAAG ATTAGAAAAA TGAAATATAT ATAAAATCGT TAGTAGAAAA TACATCAAGA
  AAATGCACCG CCCACGGGAT AAGCAAAAGA TAGAACATAC ACTCTTCTAG AAAAAATATT
  TACATTAGTC AAGAAAGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45499369	mCV22572963	ABI	CRAMUS_MOUSE	f	SNP		A					G
ss47450031	NES10330368	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A	G	A		G	G	G	G		G	G	A	G
ss136065517	ENSMUSSNP2463203	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss321016870	CHEV_3_148601639	CHEVERUD	SCREENING_POP	f	SNP												A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30456531					SNP	G	A	G	A	G	A	G	G	G	G	G	A	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47450031	NES10330368	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148644311 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587231	regulatory region 587231	649 bp proximal