rs30456368 SNP Detail

Summary

• ID
  rs30456368
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14954462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGG TGCCAAAGAA GTGGGTTATC
  Y
  TGGAAATTGG CACCTTTGCT ACCTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45431447	mCV23564249	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss134618339	ENSMUSSNP2786638	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320667969	CHEV_3_14889402	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30456368					SNP	C	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14954462 () rs orientation: forward

Symbol	Name	Function Class
Car2	carbonic anhydrase 2	Intron
Rr573724	regulatory region 573724	1828 bp distal
Rr573728	regulatory region 573728	1977 bp distal
Rr573729	regulatory region 573729	449 bp distal
Rr573730	regulatory region 573730	within coordinates
Tssr28468	transcription start site region 28468	1986 bp downstream