rs30456213 SNP Detail

Summary

• ID
  rs30456213
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104195271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGG GCTCACTACA AAACAGCTTT
  S
  TTAAATGCTG ACCTAGAATT CTCAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J
ss45432608	mCV24645013	ABI	CRAMUS_MOUSE	f	SNP		C	C				G
ss46829178	NES10700192	PERLEGEN	MM_PANEL2	f	SNP	C		C	G	G	G		C	G	G		G	G
ss135566944	ENSMUSSNP5025084	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss320860091	CHEV_3_104091878	CHEVERUD	SCREENING_POP	f	SNP											G			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J
rs30456213					SNP	C	C	C	G	G	G	G	C	G	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46829178	NES10700192	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104195271 () rs orientation: forward

Symbol	Name	Function Class
Rr582481	regulatory region 582481	136 bp proximal
Rr582482	regulatory region 582482	1117 bp proximal