rs30455775 SNP Detail

Summary

• ID
  rs30455775
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:101010914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACCAGCTA AGAGGATGCA GGGACCGTGC TCCACACTAC
  ACCACTCCTC CCAAACTCTG CCTGCACCTC CTCATCTCTG GACCATGCAG AGCCAGGGAC
  W
  CTTCCTGAGC TCCAACCTCA CTGTCCCTGT GCTGTGGAGT CCCTCTCCAG CCCGTTCCCC
  AGGCGGCTCT TCCACATGCT GGTGTCTCCC GGATCCTAC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45431534	mCV23027408	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30455775					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101010914 () rs orientation: forward

Symbol	Name	Function Class
Ptgfrn	prostaglandin F2 receptor negative regulator	Intron
Rr581960	regulatory region 581960	1819 bp proximal