rs30453242 SNP Detail

Summary

• ID
  rs30453242
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39450331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

       ACACA CACAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGTAGGG AGAGGGAATT
  ACAGTGACCC ATAGCAGAAT AAGAGTGGGG CAGAGCTGAA GAATAGGGTT TCAGATTTGG
  TAGAAAAACA TCCTGGTGTC TTCAAGTCAC TGAACCTAAA CAGTATTTCA GGATGGAGAA
  GAATTCTCTC AACTACAAAG GCAAAGAGCT GGCTAGTGAT CTGAGCTATG CTGTTGAATT
  K
  AGGCACTTTC TACATTAAAA AAATGTAACC AAGCATGAAC CATTAATTTT CATAAAATTA
  ATTATCAAGA TGCTTTATGG CCTAAATATA AATTAACTTC AACAAAAAAG AAGAGTATTT
  AATAGATCTA ACTGTAATGA TTGCCCAGAA AAATATCCCA AAGCCAGTCA AATGATCTTC
  TAAATTCACC AAAACTGTGA TCTGAGCATT AGCTTCTGCT TGTTCAGTAG CTAGTTTTTA
  TAGGTCTTTT GCTTTTGGAG GGATTTCTTG GGGGGATTGG TGCAACTAAA GCAGTTTTAA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45430452	mCV25360396	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	T
ss134850318	ENSMUSSNP100032	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30453242					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39450331 () rs orientation: forward

Symbol	Name	Function Class
Rr575754	regulatory region 575754	892 bp proximal