rs30451981 SNP Detail

Summary

• ID
  rs30451981
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143656166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTCATGAC CTTCTATAAC
  AAATTTTTAC AAGCTTTGTG GCCTCACAGA ATCTTTTATC TTAGTTCTGA AGACTACAAG
  GTGCTCATAA TGCCCTGAAT TAATCAAACA GTCCAGGAGA AATGTTTTGA GAGCCGCAGT
  TGACCCACAC AACAAGGCGA TAATCAGCGG TGTTGGTTCT TTAATCCAGC ACATCACTTC
  Y
  GAAAGGGTGT TCTGCTGAGC ACTGGGCCCT GGGGATTCTT TAGATTTTAA AAATATAGGG
  GTTAGGATTA AGGTGTTCTA GAGTCAAATG AGTTTGGAAA ATCTGAACTC CTCCTTGGGG
  TGTCACAAAT CACAGTAGTT CAGTAAAGAT TTGATCTGAC ACATGCTTGG GAAGCTGTTT
  AACTTTGTCA GATTCATTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45429280	mCV22812365	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30451981					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143656166 () rs orientation: forward

Symbol	Name	Function Class
Rr406686	regulatory region 406686	1919 bp distal
Rr586569	regulatory region 586569	326 bp distal