rs30451952 SNP Detail

Summary

• ID
  rs30451952
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:79401370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATCCACT GAAAAGGCTC
  ATGTGGCAGC ACAGAGCCAT GATCGAAGCA TCCCCACTGC GAGTGACAGG CAGGGACAGA
  AGAATTGGTG GTGGGACACT CGCAGGCCTG CTAGCCTAGA ATACGACACA GGAGAAACAA
  GAGAAACCTT GCCTCAACAA GACAGAAGGC AAGAACTGAC TCCTGAAAGT TGTCCTCTCA
  Y
  GCTCACGGTG CTCTCTGGCA CATGTGTGCC CTAGAATATA AAACAAACGA ACCACGGAAA
  CTCGGGTCCT TGTTTTTTAA TGATAGGTAA GAACAGATGA GAGACTCAGA AGACGGGTCC
  TGTGGAATAT TCATGCTTCG ACACTCACTG GCACCATCCC CAAGGCTATT AATACCAATA
  GATGAAGTAA CTCCTCTAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45429647	mCV24554585	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss135372335	ENSMUSSNP5479257	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30451952					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79401370 () rs orientation: forward

Symbol	Name	Function Class
Fnip2	folliculin interacting protein 2	Intron
Rr578528	regulatory region 578528	1303 bp proximal