rs30451849 SNP Detail

Summary

• ID
  rs30451849
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151773060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCAGACT CTGCAGGCAG
  ACTGTAGTAG AGGCAGAGAC CTGCCCCGAA ACTCAACAAG TTATTTCTTG TGCCCTAAGA
  GGTCTGGATG AGGGCACAGA TGCCACAGGG GCAGCACCTC CCCACAGAAA TGAGGAGGGT
  GTCAGAGAAA TGGGGGCTCA CCCTCCCGGT GTCAGCAAGG CCGAGCGAAT CTCCCTTCAC
  K
  TACACTACTG TAGCTGGCCC GGTGTTCCCT TAAACAAGTT TCTAGAAGTG GGACAGAGTC
  GGAGCAAAGG GCAGCTCTGA GCCTTTTCAT CCACGTTATC AATCAGCAGA CAGCGCACAG
  ATCTCCGTTC CCTACAGCAG TGGAGGAGGG CAGCCATTCC TTCACACTGG GCTGGGCTGA
  CCGGGTTAGA TGATGCCTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45431490	mCV24211741	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss136100490	ENSMUSSNP2330239	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G		T
ss321027908	CHEV_3_151730387	CHEVERUD	SCREENING_POP	f	SNP				T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs30451849					SNP	T	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151773060 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	275 bp upstream
Rr587440	regulatory region 587440	483 bp distal
Rr587441	regulatory region 587441	557 bp distal