rs30451498 SNP Detail

Summary

• ID
  rs30451498
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:129645566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGGCAGTA GTGTCTCAAA
  CTCAATGACA GCCTTGTCTA TAGAAATCTA TGTTGGTTCC AGGAACAAAA CTATGCAACA
  TTTGTCCCTA AAACAAAAAT GTGAAGGAGT AGTCTAGAGT AAATTCCTTG TCTGTCATGC
  AAATAAAAAT ACTCATAAAT AAAAATAGTC ATAAATAAAA ATATCAGTAA TAGGAAGCAA
  R
  ACTTCACATG AATGTTTTTT TGAATGCCTA TAATATAATT GAGCTGAAAG ACTAATATAG
  GTATATTCAT TTTATACTTT TTAAAATAAT GATTTAGGTT ATTTTGAAAT TTTTGATGTG
  TGATAATGGT CAAGGACTGG ATGCTTTGGG GGTGCATGGA TAGTATTTTT TTCACTTGTA
  TAGTCATTAT CTCACTATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	BTBR T<+> Itpr3/J	C57BL/6J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45929538	mCV22781768	ABI	CRAMUS_MOUSE	f	SNP		A		G
ss60946612	NES16174331	PERLEGEN	MM_PANEL2	f	SNP	A		G		G	G		G	A	G		A
ss133659390	ENSMUSSNP1189209	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss321950402	CHEV_6_129618621	CHEVERUD	SCREENING_POP	f	SNP							G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	BTBR T<+> Itpr3/J	C57BL/6J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs30451498					SNP	A	A	G	G	G	G	G	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60946612	NES16174331	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:129645566 () rs orientation: forward

Symbol	Name	Function Class
Klrc1	killer cell lectin-like receptor subfamily C, member 1	Intron