rs30449735 SNP Detail

Summary

• ID
  rs30449735
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:116532514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGATT CTTAGCATCA GTTCTACTTA
  R
  TGTTAGGTGA GAGAGAAGGA AGACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45430797	mCV24029355	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss135671476	ENSMUSSNP1958102	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320896026	CHEV_3_116441783	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30449735					SNP	G	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116532514 () rs orientation: forward

Symbol	Name	Function Class
Agl	amylo-1,6-glucosidase, 4-alpha-glucanotransferase	1134 bp downstream
Gm54181	predicted gene, 54181	Intron
Gm64822	predicted gene, 64822	within coordinates
Rr583772	regulatory region 583772	1461 bp distal
Rr583773	regulatory region 583773	1107 bp distal
Rr583774	regulatory region 583774	1359 bp distal