rs30449734 SNP Detail

Summary

• ID
  rs30449734
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87662049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTT GATGCTAAAC ACACTCAGCA
  R
  CTGAATTCAA AGATTCTCAC TGATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45430796	mCV25326269	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss135468086	ENSMUSSNP3568733	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs30449734					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87662049 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13335	CpG island 13335	1121 bp proximal
Pear1	platelet endothelial aggregation receptor 1	Intron
Rr579538	regulatory region 579538	1378 bp proximal
Tssr33951	transcription start site region 33951	1483 bp upstream