rs30449597 SNP Detail

Summary

• ID
  rs30449597
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105097728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTAAAAAA TGTGCCTGTG TTTATAGTGT GTGCTACATG
  TGGGGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGCATGG AGGCCTGGGG
  Y
  AGATGTTGGG GGTCTTACTG AGTCTCTCTC TACCTAATTA TCACAGCAGA ATTTCTCAAT
  TAGAAGCGTT CACAGATATG CTAGTCTACC GAGCCAGCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45430898	mCV23173826	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss135573940	ENSMUSSNP3748267	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30449597					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105097728 () rs orientation: forward

Symbol	Name	Function Class
Rr582682	regulatory region 582682	1396 bp proximal