rs30449429 SNP Detail

Summary

• ID
  rs30449429
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101224646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTTCATT TACATTTCAA
  ATGCTATCCA AATGCCCTCC CCTCCCCTCC CCACCCCCCT ACCCACCCAC TCCTACTTCT
  TGGCCCTGGC ATTCCCCTAT ACTGGGGCAT ATAAAATTTG CAAGACCAAG GGGCCTCTCT
  TCCCAATGAT GGCCGACTAG GCCATCTTCT GCTACATATG CAGCCAGAGA CACGATCTCC
  R
  GGGGTACTGG TTAGTTCATA TTGTTGTTCC GCCTATAGGA CTGCAGGCCC TTTCAGCTCC
  TTAAGTACTT TCTCTAGCTC CTCCATTGGG GGCCCTGTGA TCCATCCAAT AGCTGACTGT
  GAGCATCCAC TTCTGTGTTT GCCAGGCACT AGCATAGTCT CACAAGAGAC AGATATATCT
  GGGTCCTTTC AGCAAAATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45430404	mCV23816618	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss320851828	CHEV_3_101121253	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30449429					SNP	A	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101224646 () rs orientation: forward

Symbol	Name	Function Class
Gm64409	predicted gene, 64409	1070 bp upstream
Rr582007	regulatory region 582007	766 bp proximal
Rr582008	regulatory region 582008	889 bp proximal
Rr582009	regulatory region 582009	974 bp proximal
Rr582010	regulatory region 582010	1081 bp proximal