rs30433185 SNP Detail

Summary

• ID
  rs30433185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:14370317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT AGGTCTATTT AATACTAAAG
  R
  GATGGATGCT CAGAGACCAC TTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39185361	mCV25365782	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss138986243	ENSMUSSNP332238	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30433185					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14370317 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi6156	CpG island 6156			658 bp proximal
Pxk	PX domain containing serine/threonine kinase			Intron
				Noncoding-Transcript-Variant
Rr487874	regulatory region 487874			within coordinates
Rr487875	regulatory region 487875			1191 bp proximal
Tssr4245	transcription start site region 4245			143 bp downstream
Tssr124235	transcription start site region 124235			1160 bp downstream