rs30421867 SNP Detail

Summary

• ID
  rs30421867
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5541749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTCTTCCTA TCTCCCAGTC TTTCCAGTTT TGTTGATCAC
  TACACAGTGT CTCTTGGGCT GGTCCCATAC CCTATATGCA GCTCTCTTTG GAATGCTATC
  W
  CATGGCTCTG GTACCTACAA CATCTGATGA TCTTCAATGC AATCCAGGCT TTACAATCAC
  AGCTTCAAGC TATGGCCTCT CCAGGACTCC ATGAAGGAT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45928900	mCV25358851	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	A
ss132937726	ENSMUSSNP1210075	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		A
ss321729485	CHEV_6_5491749	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30421867					SNP	T	T	T	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5541749 () rs orientation: forward

Symbol	Name	Function Class
D6Mit179	DNA segment, Chr 6, Massachusetts Institute of Technology 179	1251 bp distal
Rr626156	regulatory region 626156	1398 bp distal