rs30419795 SNP Detail

Summary

• ID
  rs30419795
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58425130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGTAGCTAG CAGCTCACAG CTGTCTGTTA CTCCACCTTC
  AGGGGGATCT GACAGCCTTT GGTCACCCCC CATGGGCACT GCAAACAACA GGTGGTGTCC
  R
  TACATTCAAG CAAACAAAAA CACCCATACA TATAAATAAT TTTTAAAAGG AAGCCTAGTC
  TTTTTCAACT TTTTCCAATG TCAGTTTGCA GACGGGGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45428731	mCV24915830	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss135207026	ENSMUSSNP1973140	ENSEMBL	ENSEMBL_Sanger	f	SNP				G
ss320783116	CHEV_3_58321631	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30419795					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58425130 () rs orientation: forward

Symbol	Name	Function Class
Gm65507	predicted gene, 65507	291 bp upstream
Rr397679	regulatory region 397679	851 bp downstream
Rr397680	regulatory region 397680	151 bp downstream
Rr577244	regulatory region 577244	1200 bp distal
Rr577245	regulatory region 577245	within coordinates
Rr577246	regulatory region 577246	302 bp proximal
Tssr29205	transcription start site region 29205	208 bp downstream
Tssr29206	transcription start site region 29206	163 bp downstream