rs30416247 SNP Detail

Summary

• ID
  rs30416247
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56044070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCTCTCTCT CTCTCTCTCT CTCTCGATTG CCCAGAAGTC ATTCTTCTGA AAGACACCAG
  GTGGCAGCAA TGCCTAAGAA GTGGCTGACA TAGTCCGGTT AGCCCCATGT AATTGAATCC
  ATTTAAATAA ATCAGGTAAG TTGGAGAAGT GGCTGTCTTT GCCAAGTCCT TGAGCCACTA
  ATCATTATGG CTTCAGCCTC ACTTCCAGAA ATGAGAACAG CCTGAGTAAC ATCCACTAGT
  AGCACCATTT TTTTTGGCTT ATGGACAGCC CAGACCCTAC TGAATTTAAA GAATTGCCAT
  R
  CCGTACCATC ACCTGGTCCA CACTCTGCTA CCAGACCACA CTCTGACACT CTGGATTACT
  GCAAAGCCTA CACACATGGA CATTCCTGAG GTAGACACCT CGACAGACCT TCCCCTCTAA
  GGACTAGGAT ATCCTGTCTT CTCGGGGAAT TTTGAATTTT AAAAAACAAA GCAGAGGAAT
  ATGGAACAAA ATGGCATTCT AAAAACATTT TTGACATAAT AAGAAACCTG GCCAGCAGAG
  CAGATCATTA AAATAAAGGA AGTATCGAGT CCTTTCCTGG ATGTGGGTGC TGACTGGCTT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45927352	mCV24073352	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30416247					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56044070 () rs orientation: forward

Symbol	Name	Function Class
Rr379404	regulatory region 379404	500 bp downstream
Rr631046	regulatory region 631046	within coordinates
Rr631047	regulatory region 631047	230 bp distal