rs30412948 SNP Detail

Summary

• ID
  rs30412948
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:117659301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAC ATCTCAAAAG TAAGTAGATG
  Y
  GATGGTGTGT AATAAAAATA AAGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45428538	mCV24018923	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss135694668	ENSMUSSNP6159358	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss320900591	CHEV_3_117568570	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30412948					SNP	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117659301 () rs orientation: forward

Symbol	Name	Function Class
Rr583873	regulatory region 583873	2 bp proximal
Rr583874	regulatory region 583874	1246 bp proximal
Snx7	sorting nexin 7	Intron