rs30412898 SNP Detail

Summary

• ID
  rs30412898
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113580572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA AAGAGAGAAA GAAAGAGAGA
  R
  AGAAAGAGAG AGAGAAAGAG AGAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45925623	mCV25128659	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30412898					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113580572 () rs orientation: forward

Symbol	Name	Function Class
Brk1	BRICK1, SCAR/WAVE actin-nucleating complex subunit	1161 bp upstream
Cpgi17850	CpG island 17850	764 bp proximal
Gm67049	predicted gene, 67049	within coordinates
Rr636549	regulatory region 636549	671 bp proximal
Rr636550	regulatory region 636550	895 bp proximal
Rr636551	regulatory region 636551	1114 bp proximal
Rr636552	regulatory region 636552	1663 bp proximal
Tssr58230	transcription start site region 58230	1138 bp upstream