rs30412888 SNP Detail

Summary

• ID
  rs30412888
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5439897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAT ACAAGGCTGT GCCAGGTAGG
  S
  TTATGTAAGT AGATGCCATG ATGCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45925223	mCV22684073	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss132937306	ENSMUSSNP2203093	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321729119	CHEV_6_5389897	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30412888					SNP	C	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5439897 () rs orientation: forward

Symbol	Name	Function Class
Rr626148	regulatory region 626148	1817 bp distal