rs30411797 SNP Detail

Summary

• ID
  rs30411797
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95186108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAATAACTCT CTACATTGGA GGCTGGATAT ACGGCGGTTA AGAGCGCTGC TCTTCCAGAG
  GCCAGAAATT CTGTTCCCAG GACCCAAGTC ACACCTGCCT GTAACTCAGA TCCAGGCATC
  CTCTTCTGGT CTCCTCAGAA CATGCATGTT CAGACATACA CATACACACA GTCAGACAGA
  CACCATGTGG TTGCTGGGAA TTGAACTCAG GACCTCTGGA AGAACTGCTA GTTCTCTTAA
  CCACTGAGCC ATCTCTCCAG CCCTGAGAGT TGTTCTTTAA TATTTTTTTT TTACTTATAT
  Y
  TTAAGATTTT GGAAAAAAAA AACTTTAAAA AAATTTTAAA TCATTTGTGT ATGTATAAGT
  ACAGGTGCCT TCAGAGATTA GAGATCCCAC ATTCCCCTGG AACTGAAATT ATGGGGTTTG
  TGAGCAATCC AGTGCTAGAA ACAGAATTTG TTCCATTGCA AGAGCAGTAG GCCTTTTAAT
  GGGTGAGCCG TCTTTTTAGC CCCTAAATAA TATGTGTGTG TGCGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGAAGATGAT AAACCCATTG TTTTGTGAAG ATAGAGTGGA AGAGGCAGAC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J
ss45428023	mCV23274608	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J
rs30411797					SNP	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss135510482	ENSMUSSNP4650556	ENSEMBL	ENSEMBL_Sanger	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95186108 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580884	regulatory region 580884	1067 bp distal
Rr580885	regulatory region 580885	1833 bp proximal