rs30411271 SNP Detail

Summary

• ID
  rs30411271
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79959630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAGAGGCA AGTGAGGGTC
  ACGTTGCTAT GCTATCTCAT GCTGTCCAAT TCTCCAGCGT CATTCAGCCA GCACCAACCT
  TGGCATCCTG GCAGTGTTTC AGAATGCTTG CTTCCTCAGA AGTTCAACGC TGTACACTGA
  ACACTGTGTT TGCTTCCCAG TTATAGAAAA CACTTGCAGC TTTGCTAATG TTTCCTGTGG
  K
  TTTTTTTTTT TGTGTGTGTG ACTATTTTCT TATGGTTATT CTAATACTAT GTATTATTCT
  ATTTAAGATT TTTCCAGATG TCGATGAATA ACAAAATAAC ATTTTGTTAT TTCTGTATAG
  ACTTAAGAAC CAATTTGTAA ATTTCCTGAG AAATTCTGGT AACTCTATGA TGAGTAAATT
  AAATTTCAGC AGCATGGTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45428425	mCV23377006	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss135378799	ENSMUSSNP7098936	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30411271					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79959630 () rs orientation: forward

Symbol	Name	Function Class
Gm65495	predicted gene, 65495	within coordinates
Rr578634	regulatory region 578634	within coordinates
Rr578635	regulatory region 578635	593 bp proximal