rs30411077 SNP Detail

Summary

• ID
  rs30411077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36818865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTAAAGA TCAAATGTTG
  CCATGAGACA AAGCCATTTT CAAAATGATG TAAAGAAAAT AACAATGTAA TTACAGCCCC
  TTCGGATCTT GAGTCCCTAC TAGTGACATG CCTAAAGATC GTCAAATATC CCCCACCTAA
  GTGCTTCCAG ATGTTGAAGG TTTGTAACTC TGTATGCATG TCCACTGCAC TATTTGGCAA
  Y
  TCATACTTCA TCTTCTTTAT ATTTAATCAA AACCCACTGA AAATTCTGCT TATTATTCCT
  GGTTTAGCTC CCGAGGGCTG GGATAAATAA ATCTTAGCCT TTACTTAAGT AGAGTTTCTA
  ACTTTCATCT TAAAGCTTTA GTTTCAAGGA TTTTTTTTTT TAGACCATTA CCAGGATTCC
  AAGGAAATGG AAATACAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45926399	mCV24808968	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133122100	ENSMUSSNP283674	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30411077					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36818865 () rs orientation: forward

Symbol	Name	Function Class
6430604M11Rik	RIKEN cDNA 6430604M11 gene	within coordinates
Rr628572	regulatory region 628572	within coordinates
Rr628573	regulatory region 628573	525 bp proximal
Rr628574	regulatory region 628574	1109 bp proximal