rs30410985 SNP Detail

Summary

• ID
  rs30410985
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:15789176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT CTCTCTGTCT CTGTCTGTGT
  K
  TGTGTCTGTG TTTCTCATAA ATAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45925199	mCV23800767	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss133007002	ENSMUSSNP1490454	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T	T
ss321752322	CHEV_6_15739177	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30410985					SNP	G	G	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:15789176 () rs orientation: forward

Symbol	Name	Function Class
Mdfic	MyoD family inhibitor domain containing	Intron
Rr399575	regulatory region 399575	986 bp upstream
Rr626687	regulatory region 626687	152 bp proximal
Rr626688	regulatory region 626688	1118 bp proximal