rs30409445 SNP Detail

Summary

• ID
  rs30409445
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:103243752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT TTTGTTTTTT TTTTGTTTTT
  R
  TTTTTGTTTT TTTGAATGGG AAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45427619	mCV24543173	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss135560674	ENSMUSSNP6691817	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss320856927	CHEV_3_103140359	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30409445					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103243752 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr582347	regulatory region 582347			837 bp distal
Trim33	tripartite motif-containing 33			Intron
				Noncoding-Transcript-Variant