rs30407188 SNP Detail

Summary

• ID
  rs30407188
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:60927586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGTTCTAG AATTAGACAA
  GTGCTTATTC AAAATGGATA ATTCAATAGG AAACTTCCAT ATTCCCACAC CTTTTGCTTT
  TCTAATTATA AAGCTATGAG TTAAAAGTAT ATTATTTAGG AAGACAGGCT GAAAGAGTCA
  GTTGGTAGGA CTAGTCCTTT AAGCAGAAAA CAGACATCAC ACATCTAACC TGCATGTCTG
  M
  TGCCTGGAAA AGCCTGACCC CTGCTGGACC AGAAGACATC TGCGCCACTC TGCTGAGCTC
  ACAGTCTAAA GAAAACCAGA AGAAAAGAAA AATAAAGTTT GGTAAATTCT TTTAAAAGGT
  CACGTCACAG ATTGACGACA AATGTATGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	PWD/PhJ	WSB/EiJ
ss47944648	NES11656912	PERLEGEN	MM_PANEL2	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	PWD/PhJ	WSB/EiJ
rs30407188					SNP	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47944648	NES11656912	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:60927586 () rs orientation: forward

Symbol	Name	Function Class
Mmrn1	multimerin 1	Intron
Rr631309	regulatory region 631309	within coordinates
Rr631310	regulatory region 631310	11 bp proximal