rs30407032 SNP Detail

Summary

• ID
  rs30407032
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81667339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCT AATGAGGATG TTCTGCTATA
  M
  TTATGGATTG GTGTCTAATG TCCTC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss45426806	mCV24535978	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
ss60421979	NES15919481	PERLEGEN	MM_PANEL2	f	SNP	A	A			A		C	A	C
ss135396865	ENSMUSSNP6871571	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		C
ss320816596	CHEV_3_81563954	CHEVERUD	SCREENING_POP	f	SNP						C				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs30407032					SNP	A	A	A	C	A	C	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60421979	NES15919481	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81667339 () rs orientation: forward

Symbol	Name	Function Class
Rr578714	regulatory region 578714	264 bp proximal