rs30406282 SNP Detail

Summary

• ID
  rs30406282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:60926920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAAAGAG CTGGGGGTTT
  TATGTAGCTC AGGCTGGCCT TCAACTTGTG TTGCCATGGT TGGCCTCGAA CTCCTGGCTT
  TCACATGCCA TGTGTTGGGA TGGCAAGCGT GCAGCAGCAC ACCCAATGGA ATTGGAGAAA
  TTCCAGTATT TAATGGTCTA ATCATGGCAG ATGCCTGCAC TACAGCCTTC ACCTGGATGA
  Y
  GTCATAAGGG AGTGGTCTAC ACACATCAGA AGAAAAGCTA ATCCGTGCGT ACTATAGAAA
  GAGTAAAATG AGAACTGAGA TATCCAGCAT TCTAGTGATG TGATAGAGTT TACATGAGCT
  CCTTGCTCTA GGAACTGGCC TGTGCAGGAT GGTGGGAAAA GCTCGTCCAG ACAGGTCTCT
  ATTTTTTTCT GATGATCTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	PWD/PhJ	WSB/EiJ
ss47944642	NES11656909	PERLEGEN	MM_PANEL2	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	PWD/PhJ	WSB/EiJ
rs30406282					SNP	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47944642	NES11656909	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:60926920 () rs orientation: forward

Symbol	Name	Function Class
Mmrn1	multimerin 1	Intron
Rr631309	regulatory region 631309	602 bp proximal
Rr631310	regulatory region 631310	677 bp proximal