rs30406278 SNP Detail

Summary

• ID
  rs30406278
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:60926028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCTCTA TTTCTATTAT
  GTTCTGGGTC ACTCTGCTTT CATCCTGTCC TCACCCTGCC CTTCTAAGTC ACGAGTCTCC
  ACACATCAGT GTCCCACTCA TGTTCCACAT ACATGTTGAC AGTTTGTTTA AACATGATTG
  TTCTTCATTG CACACAATGC CTCCCTTTAT AATGCCTAAA ATGATCGTTT TAAGTACTGA
  R
  ATGAAAGAGG GATTGTGCTG TAATTTCTTA GAATGTGTTT ATCATCTCAC ACTTTGGTAA
  ACTTAAAATG AGAAAGAAAT GGAACCAGCC CTACTAAGGT ATTGGCAATA GTGACTGACT
  GGTCACTCGG TACATTAGAA AACACCTTCT GAATTCTCAG AGAAGTGTTT CTCAATCTCT
  GGAGGGGTTT AGAGTCTCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	PWD/PhJ	WSB/EiJ
ss47944638	NES11656977	PERLEGEN	MM_PANEL2	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	PWD/PhJ	WSB/EiJ
rs30406278					SNP	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47944638	NES11656977	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:60926028 () rs orientation: forward

Symbol	Name	Function Class
Mmrn1	multimerin 1	Intron
Rr631309	regulatory region 631309	1494 bp proximal
Rr631310	regulatory region 631310	1569 bp proximal