rs30406276 SNP Detail

Summary

• ID
  rs30406276
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:60925965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGAAAATC CGCCTGCCTT
  TGCTTCCGGA GTACTGGGAT TAAAGGTGTG TGCCACTACT CCCGGCTGCT CTATTTCTAT
  TATGTTCTGG GTCACTCTGC TTTCATCCTG TCCTCACCCT GCCCTTCTAA GTCACGAGTC
  TCCACACATC AGTGTCCCAC TCATGTTCCA CATACATGTT GACAGTTTGT TTAAACATGA
  Y
  TGTTCTTCAT TGCACACAAT GCCTCCCTTT ATAATGCCTA AAATGATCGT TTTAAGTACT
  GAGATGAAAG AGGGATTGTG CTGTAATTTC TTAGAATGTG TTTATCATCT CACACTTTGG
  TAAACTTAAA ATGAGAAAGA AATGGAACCA GCCCTACTAA GGTATTGGCA ATAGTGACTG
  ACTGGTCACT CGGTACATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	PWD/PhJ	WSB/EiJ
ss47944636	NES11656976	PERLEGEN	MM_PANEL2	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	PWD/PhJ	WSB/EiJ
rs30406276					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47944636	NES11656976	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:60925965 () rs orientation: forward

Symbol	Name	Function Class
Mmrn1	multimerin 1	Intron
Rr631309	regulatory region 631309	1557 bp proximal
Rr631310	regulatory region 631310	1632 bp proximal