rs30403895 SNP Detail

Summary

• ID
  rs30403895
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141748513 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TATAAGGAGA CTGCATGTAT TCCTTCCCCT CTGAGGACGC AGTATCACTA TCACAGGTCT
  ACTGCTGTGC AGCGCTCAGA TTCTGCTCTC AACATCACTC CGTGCCATCA TTTCCCACCT
  TGAAAGGGTT CAGAGCACCA AGTAGATGCT GTGATACCCT AAAGGGATGC TGTGCTAGGG
  CTGAGTCAAG GAGCACCCAT TTCAAACTGG CCACTACAAC TGTACCTTAA AAGTTCAAGA
  AAGTTATTTT AGGAATAAAT TGTATGATGG AATGGTTACT GAGAATACAG GCAAAAATTA
  M
  AATAAAATAA AATAAATAAA TGCTTCCTTA ACCTTCTCTG AGGAAAGAGA TAAGGGAAGC
  ACACGAATTT AAACACATTG TTCTAGGACT AAATGTTCAC AGATAACCAT ACTGAGGGAA
  CACATAAAAA TATTTAGATA GTTGTATTTT TTTTTTTTTT TTTGACCACG TGGAATACAA
  TAACCTGCCA GTCCTGAGCA CAAGTTACAG AGTGATTTCT GGTTTGAGTA TCTCCCAGAA
  CTGTAGTCCA GGGGGGTCTT CTCTGAAAGT GGCATGCGTC ACTGTTTAAA AATCGGGTGG
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45425129	mCV25104398	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30403895					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141748513 () rs orientation: forward

Symbol	Name	Function Class
Bmpr1b	bone morphogenetic protein receptor, type 1B	Intron
D3Mit160	DNA segment, Chr 3, Massachusetts Institute of Technology 160	1138 bp distal
D3Mit160.2	DNA segment, Chr 3, Massachusetts Institute of Technology 160.2	1006 bp distal
Rr586379	regulatory region 586379	816 bp proximal