rs30401315 SNP Detail

Summary

• ID
  rs30401315
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102181207 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGGTAGA AGAGAACGAG
  GCTCAGGAAG CCTCGGAATT TCTGGAACTG TTACTCTTAT CTTGTGCCTC TCCTTCCTCA
  GCCCACCATC AAAGTTTGGA ATCAATGACT TGTTTTGAGT TTGCAGGCTA AAGGACTACA
  GCAATCCCAC GAAGACAAAC CACACCTTGA TCCCACTGCA GATACGGACT TTGGCCTTTT
  R
  CGTTGGTGAT CCAGACCTTT GGGTCTGATA GGGAGGAGTG ATTGTGCTTT CCACTGTGAG
  AAGGACTCGG GCTTGAGGGT CTGAGAGGAA TGCTATGATT TAAATACGGT TAGCATCCTC
  CAAAACTCCT AAGGAAACAT TATCGGACAC TGGTGAGACC ATCAGAGGAG TCTTGTCATT
  AGGGCTGCGT CCTCATGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45426097	mCV25068810	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss135555673	ENSMUSSNP1833450	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss320855288	CHEV_3_102077814	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30401315					SNP	A	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102181207 () rs orientation: forward

Symbol	Name	Function Class
A230001M10Rik	RIKEN cDNA A230001M10 gene	within coordinates
Gm65464	predicted gene, 65464	within coordinates
Rr582219	regulatory region 582219	1363 bp proximal
Rr582220	regulatory region 582220	1843 bp proximal