rs30400267 SNP Detail

Summary

• ID
  rs30400267
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125098853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGTATCT TTGATTAAGT
  ATCTTTGAGA GTAGAGATAT ATTATTAAAC TAACAACTGC AATATATTAC TTAAACTAAC
  AAGCCATATG AAATATTTAT ACATTTTATG AAAATATTTT AACAACTCTG TTTAAATTAT
  AAAGTAAAGA TACTATGAAA TACATGTACA CTAGTTGTCC AATTTTACAA TCTTATCTAT
  W
  CAATACTTCC TCAACTGATA ACATTTATGG AACAACAGTA GAGTTGCTTT AATGTAGTAA
  GTTATTTATA TTCCAAAAAG CCAAAGACAG TGACTGTGGC CACATAATTG ATGAGTTAAA
  CGAGTTTTCT TTCTGCAAAA CAATTTTAAA GCTGAGTAAC CCAAATTTAT TAGCTGTGTC
  CAGATGGAGC ATAAAGCCAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45426288	mCV24036729	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	A
ss135806104	ENSMUSSNP3695444	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss320935439	CHEV_3_125008122	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30400267					SNP	A	T	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125098853 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	1537 bp proximal