rs30383648 SNP Detail

Summary

• ID
  rs30383648
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:53467669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTGTTGG TGTTTGGATA
  GATGCAGTGT TCTCCATAGG AAAAGCGAGA TGCCTGTGAC ATACTTCTAG TATAAGAAGC
  TGGATTTTTG AGGCACTGAC ATGAGTGGGT GAGGAGAAGG CTAAGGGGTG TGGGTGGAGT
  GGGAGGGTGC CCTGGGCTGA GCAGTAGTGT GGATGAGTCC CTGGCTTTTT TTGGCTGGAG
  R
  TGGCACCATT TGACATGGCG CAGTATGGTC CTTGGTGAGA GGAGACAAAG GAAGGCAGGG
  AAGGCAGGGA GACAATGGGC AATGGGCAGG CTCTGCAGGT CCCTGTAACT GGAGCCTTGT
  CATGGAGACA TCTGATAAAA GATGTGCTCA ATTGTAACAT GGGCAGAAGC CTGCTGGGAT
  GTGCATTTAG AGGTATGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46943468	NES10831435	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30383648					SNP	A	A	A	A	A	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46943468	NES10831435	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53467669 () rs orientation: forward

Symbol	Name	Function Class
Frem2	Fras1 related extracellular matrix protein 2	Intron
Rr576717	regulatory region 576717	1087 bp proximal