AGACTTTTGG TTTCTGGGTA ATAGGATGTG ACCGTGCCCA GGGGTGGAGT CATCAGGTTG AAACCAAGTT GAGCGTCTGT GTACCTTTTG GCAAATTTAT AGTTCACTTA AAATTGTTCT TTGGTGAAAG CTCTTTGCCT GCTTGGGAGG AACAGACAGG CAGGAAAGAT GAGTTATAGT TGCTAAAAAA TAGTGTTATC Y TTAGGGTTTT ACGCTGAATT TTATATCAGG TGCCTGAAGG CTGTGCTTTT CTACAGAAAG AGCCTAGAGG CTACCCGAGT TCCATTTTAC CCACTGTGTC TTAACAGGAT AGGAAGCAAA GGAGAGAGGG AAGGGTAAAG AGAGGAGGAG GAAGAACATT TAATAGTCGT GAATTTTTTA TTTAAAAATT TCTTTATAAA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46941836 | NES10799994 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | T | T | C | T | T | T |
SNP Consensus Information | |||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs30372686 | SNP | T | T | T | T | T | T | T | T | C | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46941836 | NES10799994 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr3:53399011 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr576707 | regulatory region 576707 | 217 bp proximal | ||||||
Rr576708 | regulatory region 576708 | 331 bp proximal | ||||||
Stoml3 | stomatin (Epb7.2)-like 3 | Intron |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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