rs30371281 SNP Detail

Summary

• ID
  rs30371281
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72872903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTACAAC TAATATTAGG
  TGACACCACA CATGCTTCCT TTTATTTTCC TTTGGTGCTG AAAAATAAAC TCAAAGCTTA
  CGCTGCAGGT TAACCACGTA CTGCAAGGCC AGGGATGCAG CTTGGCTGTA AAGTGCTTAC
  CCAGCATGTA TGAAGCTCTG GGTTCAAGTC CAACACTACA TAAACCAGAC ATGGTGCTAC
  R
  TGCCTGTTAG CTGGGAAGTT GAAGGAAGAA AACCTCAAGG TCACTCTTGG TCACAAAAAC
  TTCAAGACCA GCCAGAAACC TATGACCCTG TCTCAAAAAT AACAAGCAGA ACAACACATG
  TGTTCCACAA CTGAGCTATA GTCCTAGCCA GAGACAGTTT AAAAAAAAAA CCTAGAAAAC
  AGAAAATGAC TGGGTTTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45923103	mCV22364464	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss133287907	ENSMUSSNP5580138	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
ss321823134	CHEV_6_72845914	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30371281					SNP	G	G	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72872903 () rs orientation: forward

Symbol	Name	Function Class
D530018E20Rik	RIKEN cDNA D530018E20 gene	1 bp upstream
Kcmf1	potassium channel modulatory factor 1	Intron
Rr632326	regulatory region 632326	562 bp distal