rs30371274 SNP Detail

Summary

• ID
  rs30371274
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:71956790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAG AAAACCCTGC CCTGAGGACG
  M
  AGCCTGCAGG ATAGATAGGG CATTC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45923095	mCV24564944	ABI	CRAMUS_MOUSE	f	SNP		C	C				C	A
ss47975808	NES11901589	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	A		A	C	C		C	C	C	A		C
ss133280789	ENSMUSSNP2988842	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C					A
ss321820003	CHEV_6_71929800	CHEVERUD	SCREENING_POP	f	SNP											A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30371274					SNP	C	C	C	C	C	A	C	A	C	C	A	C	C	C	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47975808	NES11901589	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71956790 () rs orientation: forward

Symbol	Name	Function Class
Gm68334	predicted gene, 68334	within coordinates
Polr1a	polymerase (RNA) I polypeptide A	mRNA-UTR
Rr632036	regulatory region 632036	208 bp proximal
Rr632037	regulatory region 632037	1639 bp proximal