rs30368326 SNP Detail

Summary

• ID
  rs30368326
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50577294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGTTGCA CATGTTTTAA
  ATGATGAAAC GCAACGGAAT TACATTCAGG GGCTCAAGAG GCTAATGACA ATTTGCCAGA
  AGCACTTTCC CACAGACCCA TGGAAATGTG TGGAGTATAA TGTGCTGTAA GATCTGTGTA
  TGGTCTGGAA CAGGAAGCCT CTGCCTGCAG CACATGGACC TCTGGCCTTC CCATAGTTAC
  R
  AGGGAGAGAT GAGCTCCACA GTGGGCATCC ACCTGGTGCA AATCTTGTTG ACTTCAAGAG
  CTGTGTTGGT TTACACATGG TGTTGGACTG CAAACTAAGT TTTGTGTCTT GGTCTTATTT
  GACTCAGATG AAAAATTAAG TTCTCAAGAT GTCCTGTGTA GTTTAAATGT AGACAACCAC
  CACAGAGGAG AGGGGGTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45921574	mCV24540457	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss133182410	ENSMUSSNP5046450	ENSEMBL	ENSEMBL_Sanger	f	SNP				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs30368326					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50577294 () rs orientation: forward

Symbol	Name	Function Class
Gm38807	predicted gene, 38807	1244 bp downstream
Gm44054	predicted gene, 44054	74 bp downstream
Rr630048	regulatory region 630048	1364 bp distal
Rr630049	regulatory region 630049	1386 bp proximal
Rr630050	regulatory region 630050	1481 bp proximal